资源导航

1. SeqSolve: Simple analysis of Next Generation Sequencing data.; 标签：RNA-Seq, ChIP-Seq,Transcriptomics, Small RNA transcriptome
2. CASHX: Parse, map, quantify and manage large quantities of short-read sequence data.; 标签：Small RNA transcriptome
3. SeqBuster: SeqBuster, a web-based bioinformatic tool offering a custom analysis of deep sequencing data at different levels, with special emphasis on the analysis of miRNA variants or isomiRs and the discovering of new small RNAs.; 标签：Small RNA transcriptome, MiRNA
4. MirTools: Web server for microRNA profiling and discovery based on high-throughput sequencing; 标签：Small RNA transcriptome, MiRNA
5. E-miR: Perl tools for processing miRNA sequencing data; 标签：Small RNA transcriptome, MiRNA
6. DSAP: Automated multiple-task web service designed to provide a total solution to analyzing deep-sequencing small RNA datasets generated by next-generation sequencing technology; 标签：Small RNA transcriptome, MiRNA
7. Partek Genomics Suite: Easy to use software providing A to Z analysis for all Next Generation Sequencing and Microarray data.; 标签：Allele-specific transcription,RNA-Seq Quantitation,Epigenomics, Functional Genomics, ChIP-Seq,Alternative Splicing, SNP discovery, Small RNA transcriptome
8. Avadis NGS: Strand NGS formerly Avadis NGS is a desktop software platform for alignment, analysis, visualization, and management of data generated by next-generation sequencing (NGS) platforms. It supports workflows for RNA-Seq, DNA-Seq, small RNA-Seq, ChIP-Seq, and Methyl-Seq data analysis. Strand...; 标签：ChIP-Seq, DNA-Seq, RNA-Seq,Small RNA, Methyl-Seq, Pathway analysis
9. Skewer: Skewer implements a novel dynamic programming algorithm dedicated to the task of adapter trimming and it is specially designed for processing illumina paired-end sequences.; 标签：Small RNA Sequencing, RNA-Seq,Whole Genome Resequencing, De novo Sequencing
10. Syapse: Syapse is a platform and application suite for bringing together omics and clinical data.; 标签：Allele-specific transcription,DNA methylation, DNA-Seq,InDel discovery, SNP discovery, Structural variation, RNA-Seq, Small RNA transcriptome, ChIP-Seq,Comparative genomics,Comparative transcriptomics,Epigenomics, Genomics,Personal genomics, Population ge
11. VisSR: VisSR (Visualisation of sRNAs): generate a visual representation of sRNAs and user-imported genomic features.; 标签：Small RNA transcriptome

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